Filmography
| Year | Title | Role |
| 2022 | Guillermo del Toro's Pinocchio | Director, Producer, Screenwriter |
| 2021 | Antlers | Producer |
| 2021 | TROLLHUNTERS: RISE OF THE TITANS | Producer |
| 2021 | Boris Karloff: The Man Behind the Monster (2021) | Self |
| 2021 | Nightmare Alley (2021) | Director, Producer, Screenwriter |
| 2019 | Scary Stories to Tell in the Dark | Producer |
| 2018 | Pacific Rim Uprising (2018) | Producer |
| 2017 | The Shape of Water (2017) | Director, Producer, Screenwriter |
| 2017 | 78/52 | Self |
| 2016 | Kung Fu Panda 3 | Executive Producer |
| 2015 | Crimson Peak | Director, Producer, Screenwriter |
| 2015 | FLIFF 2017: THE THIN YELLOW LINE | Producer |
| 2014 | The Hobbit: The Battle of the Five Armies | Screenwriter |
| 2014 | The Book of Life | Producer |
| 2013 | Pacific Rim (2013) | Director, Producer, Screenwriter |
| 2013 | The Hobbit: The Desolation of Smaug | Screenwriter |
| 2013 | Drew: The Man Behind the Poster | Actor |
| 2013 | Gahan Wilson: Born Dead, Still Weird | Actor |
| 2013 | La Madre | Executive Producer |
| 2013 | Extraordinary Tales | Narrator: The Pit and the Pendulum |
| 2012 | Rise of the Guardians | Executive Producer |
| 2012 | The Hobbit: An Unexpected Journey | Screenwriter |
| 2011 | Puss in Boots (2011) | Mustache Man/Comandante |
| 2010 | Don't Be Afraid of the Dark | Producer, Screenwriter |
| 2009 | Splice | Executive Producer |
| 2008 | Hellboy II: The Golden Army | Director, Screenwriter |
| 2008 | Lovecraft: Fear of the Unknown | Actor |
| 2008 | Rudo y Cursi | Producer |
| 2007 | The Orphanage | Executive Producer |
| 2006 | Pan's Labyrinth | Director, Producer, Writer |
| 2004 | Hellboy (2004) | Director, Screenwriter |
| 2004 | Cronicas | Producer |
| 2002 | Blade II | Director |
| 2002 | Asesino en Serio | Executive Producer |
| 2001 | The Devil's Backbone | Director, Writer |
| 2000 | Bullfighter | Bullboy No. 2 |
| 1998 | Under A Spell | Producer |
| 1997 | Mimic | Director, Screenwriter, Writer |
| 1993 | Cronos | Director, Screenwriter |
| 1985 | Doña Herlinda y su hijo | Executive Producer |
