Study Accession List - DRA Search
AccessionTitle or Alias
ERP115241soil fungi in arable ecosystems in a 2200km distance
ERP115243Assembly and functional annotation of the Crematogaster levior genome
ERP115244Single-cell sequencing of murine hepatocytes
ERP115245Amplified subdata
ERP115246GOS elderly
ERP115247Amplified subdata
ERP115248A carbohydrate-binding protein, FLOURY ENDOSPERM 6 influences the initiation of A- and B-type starch granules in wheat.
ERP115249Timing is everything – impact of naturally occurring Staphylococcus aureus AgrC cytoplasmic domain adaptive mutations on auto-induction
ERP115250Timeline RNAseq of fibroblast to neuron direction conversion
ERP115252Cyanobakteria in Lake Meiktila, Myanmar
ERP115253NGS gene expression analysis in the shell gland of hens laying eggs differing in cuticle deposition
ERP115254Genome sequencing of filamentous V. cholerae strains
ERP115255A novel toolkit for the efficient delivery of Cas9/sgRNA complexes to chromosomes in cells
ERP115256Analysis of the gut microbiota in alopecia areata: bacterial biomarkers findings
ERP115257RNA-seq of etiolated 9 day old maize seedling second leaves after exposure to either blue, red or no light conditions for three hours
ERP115259Endometriosis in mice and association with dysbiosis during the acute phase of lesion formation
ERP115260Faecal virome transplantation decreases symptoms of type-2-diabetes and obesity in a murine model
ERP115261Changes of porcine gut microbiota in response to dietary chlorogenic acid supplementation
ERP115262Changes of porcine gut microbiota in response to dietary chlorogenic acid supplementation
ERP115263RADseq of progeny tetrads of strain Tecc-FY-1
ERP115264Clytia hemisphaerica Trinity-assembled transcriptome.
ERP115265Molecular analysis of clinically defined subsets of high grade serous ovarian caner
ERP115266Ancient Rome: a genetic crossroads of Europe and the Mediterranean
ERP115267HFE145 MBNL1 knockdown cells were generated using a siRNA. Control cells are similarly transfected but with scrambled siRNA
ERP115268Compositional and functional alterations of intestinal microbiota in different clinical settings of chronic hepatitis B virus infection
ERP115269Environmental DNA simultaneously informs hydrological and biodiversity characterization of an Alpine catchment
ERP11527016S Metagenomics of mosquito abdomens
ERP115271Pretomanid MIC testing
ERP115272Genomic analysis of Staphylococcus capitis isolated from neonates at a neonatal intensive care unit in Sweden
ERP115274Secale cereale Lo7 assembly - Hi-C raw data
ERP115275Characterization of Bacillus cereus sensu lato isolates from consumers milk; potential for spoilage and disease
ERP115277Changes of porcine gut microbiota in response to dietary chlorogenic acid supplementation
ERP115278RNAseq of bulk regulatory T cells (Tregs) and conventional T cells (Tconvs) during acute kidney injury and fibrosis development
ERP115279Response of rhizosphere bacterial community in Taxus chinensis var.mairei to temperature changes
ERP115283In vitro single nucleotide variability applied in vivo: drain to patient transmission of multidrug-resistant Pseudomonas aeruginosa
ERP115284Metagenomic communities associated with decaying Laminaria digitata
ERP115285Genomic analysis of the population structure of the Stenotrophomonas maltophilia complex
ERP115286Adaptive laboratory evolution of mutS Knock-out E. coli
ERP115287Secale cereale Lo7 assembly - CCS data
ERP115289Whole Genome Sequencing of TB
ERP115290Total RNAseq of human healthy control inferior turbinate and glucocorticoid-treated, aspirin-exacerbated respiratory disease (AERD) nasal polyp nasal brushings
ERP115291RNA-seq analysis of the first branchial arch of the mouse embryos at E10.5 and E11.5
ERP115292mRNAseq of human sputum macrophages and alveolar-like monocyte-derived macrophages of healthy controls and aspirin-exacerbated respiratory disease (AERD) patients
ERP115293Anthony Nolan has identified many novel and confirmatory KIR alleles to submit to the IPD-KIR Database
ERP115294We aim at obtaining the whole genome sequence of an interesting plant-associated bacteria, inhabiting rhizospheric soil of Cistus ladanifer
ERP115295Interferon gene therapy reprograms the leukemia microenvironment inducing protective immunity to multiple tumor antigens
ERP115296Detection of viruses in the major olive tree cultivars of Greece using a rapid and effective RNA extraction method toward the certification of virus-free propagation material
ERP115297Effect of sulfite addition and pied de cuve inoculation on the microbial communities and sensory profiles of Chardonnay wines: dominance of indigenous Saccharomyces uvarum at a commercial winery
ERP115298Genetic Analysis of African Lions (Panthera leo) in Zambia Support Movement across Anthropogenic and Geographical Barriers
ERP115299Genome sequence of Bacillus xiamenensis strain 19_A isolated from marine macroalgae of the species Ulva lactuca
ERP115300scRNA-seq of Mus musculus subcutaneous Lin- cells derived from the subcutaneous adipose stromal vascular fraction
ERP115301Trypsin-induced head-to-tail cyclization in a scorpion venom trypsin inhibitor peptide
ERP115303A new hydroxymethylcytocine-like DNA modification linked to gene expression is the predominant cytosine modification in malaria parasites
ERP115304Plasticity of Mitochondrial DNA Inheritance and its Impact on Nuclear Gene Transcription in Yeast Hybrids
ERP115305Clostridium merdimassiliae genome
ERP115306Faecalibacterium timonensis genome
ERP115307Bacillus massilicagae genome
ERP115308Urban Zoonosis Project (Urban Zoo)
ERP115310Multiple strains of Klebsiella pneumoniae were identified as responsible for an ICU epidemic event.
ERP115311Sequencing of Echinococcus multilocularis telomerase reverse transcriptase gene
ERP115312Genome sequencing of two Methylomonas species isolated from the river Elbe (Germany)
ERP115313IPSC model of ETO2-GLIS2 expression
ERP115314bam files of three clones of 409B2 cell line: nickase, KR-mutant, and triple-edit CSK
ERP115315Identification of microbiota involved in fructose assimilation in Aedes albopictus
ERP115316Transmission of Legionnaires' disease through toilets flushing
ERP115317Identification of promoter region for Nicotiana benthamiana gamma-thionin gene
ERP115319WGS of Shigella spp and EIEC isolates from a cross-sectional study in the Netherlands, collected during 2016 and 2017.
ERP115320Single cell genotyping of Myeloid Leukaemia of Down Syndrome cells
ERP115322Free-living bacterial communities associated to a coastal tidal front
ERP115325Receptors are affected by selection with each Bacillus thuringiensis israelensis Cry toxin but not with the full Bti mixture in Aedes aegypti
ERP115326Comparative integrated omics analysis of the Hfq regulon in Bordetella pertussis
ERP115328Analysis of fungal community associated to emerging adults of D. kuriphilus from galls on Castanea sativa trees
ERP115330E.coli co-cultivated with human gut microbiome
ERP115331Gut microbiota composition before infection determines the Salmonella super- and low-shedder phenotypes in chicken
ERP115332RNA-Seq of rice anther and pollen at anthesis stage
ERP115333Cappable RNA Sequencing of Streptomyces formicae to annotate transcription start sites under formicamycin producing conditions
ERP115335RNA-Seq of GNRH1 neurons differentiated from human pluripotent stem cells (2)
ERP115336Microbial communities in fluid fine tailings of first full-scale demonstration oil sands end pit lake: high-throughput sequencing data
ERP115337RADseq of progeny tetrads of strain FY-Sake-12
ERP115338Evolution of clinical E.coli isolates in presence of different non-antibiotic antibacterials
ERP115339Secale cereale Lo7 assembly - MP and PE data for assembly
ERP115340Alternative Interaction Sites in the Influenza A Virus Nucleoprotein
ERP115342bacteria isolated from the probiotic waste water sample
ERP115343Bacteria isolated from the cement capable of forming calcium carbonate crystals
ERP115346Re-sequencing of npm mutants and siblings
ERP115347RNA-seq of three Spodoptera frugiperda tissues (Midgut, Fat body, Hemocytes), at 2 time-points (8h and 15h) after infestation by entomopathogenic nematodes Steinernema carpocapsae/Xenorhabdus nematophila
ERP115348A protein modification introduced by food processing drives growth of a human gut bacterium
ERP115349FAANG RRBS Analysis of the horse
ERP115350IL-4R Blockade by Dupilumab Decreases Staphylococcus aureus Colonization and Increases Microbial Diversity in Atopic Dermatitis
ERP115351Applying indirect open circuit calorimetry to study energy expenditure in gnotobiotic mice harboring different human gut communities
ERP115353Cystic Fibrosis (CF) is a genetic disorder caused by a mutation in the cystic fibrosis transmembrane conductance regulator (CFTR) gene. It is the most common autosomal recessive disorder affecting Caucasians (Jackson and Goss, 2018). The disease affects >30,000 patients in the US and >70,000 patients worldwide with approximately 1000 new cases diagnosed each year.
ERP115356Genetic characterization of root-nodule bacteria from wild-grown legumes in Egyptian soils
ERP115357Genetic characterization of root-nodule bacteria from wild-grown legumes in Egyptian soils
ERP115358Targeting CD39 in cancer - a novel immune mechanism of action.
ERP115359The endemic erythromycin resistant Corynebacterium diptheriae in Viet Nam in 1990s
ERP115363Sequence variation of genes coding specific virulence factors in P. gingivalis strains
ERP115364The soil mycobiota of Colombian agroenvironments
ERP115365Confirmatory sequence for HLA-B*08:180 obtained by sequence-based typing
ERP115366Food spoilage by Brochothrix thermosphacta: role of food substrate and strain specificity for the expression of spoilage functions
ERP115367RNA-Seq in kidneys from mice retro-orbitally injected with Lenti-miR-9 to determine the global gene-expression and potential mechanisms involved in the miR-9-5p-induced changes
ERP115368Whole genome sequencing of dog specific assemblages C and D of Giardia duodenalis from single and pooled cysts indicates host associated genes
ERP115369ChIP-seq for histone H3K27Ac on mouse first branchial arch at E11.5
ERP115370Arabidopsis tissue atlas
ERP115372Comparative genomic study of 147 Escherichia coli of bovine origin recovered from animals presenting with diarrhoea and mastitis
ERP115375Effect of avaliable phosphorus on the soil microbial community and diversity
ERP115376Standardized next-generation sequencing of immunoglobulin and T-cell receptor gene recombinations for MRD marker identification in acute lymphoblastic leukemia; a EuroClonality-NGS validation study
ERP115377The wheel tree (Trochodendron aralioides) genome
ERP115378RADseq of progeny tetrads of strain Tecc-Sake-1
ERP115381Targeted resequencing in a patient with a syndromic form of neurodevelopmental disorder
ERP115382Enabling high-accuracy long-read amplicon sequences using unique molecular identifers and Nanopore sequencing
ERP115384Characterizing the involvement of FaMADS9 in the regulation of strawberry fruit receptacle development
ERP115385Clinical strains from Croatia and Bosnia
ERP115386Genomic portrait of resectable hepatocellular carcinomas: Implications of RB1 and FGF19 aberrations for patient stratification
ERP115388Transcriptional analysis of murine kidneys after caloric restriction and hypoxic preconditioning in an ischemia-reperfusion injury model
ERP115389Bacterial and archaeal community structure associated to manganese nodules at Peru Basin.
ERP115390Peripheral blood cells from patients with Hodgkin's and diffuse large B cell lymphomas may be a better source of candidate diagnostic miRNAs than circulating miRNA
ERP115391Effects of a-synuclein on the taxonomic composition and functional potential in adult rats
ERP115393Shotgun of corn roots infected with Enterobacteriaceae
ERP115394WGS was performed to characterise prevalence of drug resistance variants in Pakistan
ERP115395identification of the soybean genes resposible for UV-B stress
ERP115396Japanese Thoroughbred horse project 2019
ERP115397A comprehensive characteristics of candidate genomic regions for canine monogenic disorders of sex development
ERP115398Fragilariopsis kerguelensis population genomics
ERP115399The Genomic Landscape of Epstein-Barr virus (EBV)-associated pulmonary lymphoepithelioma-like carcinoma
ERP115400Southe-East Asian genus Hoploscopa is revised, thereby 27 new species are described
ERP115401Exogenous Bacteria Play a Role in the Ability of Blow Fly Larvae to Develop on Resources with Variable Nutrient Quality
ERP115403Phenotypic and genotypic characterization of Sudanese goat breeds
ERP115404Anxiolytic effects of a prebiotic in healthy female volunteers are associated with reduced negative bias and increased beneficial gut bacteria.
ERP115405Bulk mRNA-seq of brown adipose tissue derived from SLC25A44 knockdown mouse
ERP115406RNA-seq timeline of fibroblast to neuron conversion using traditional NC media and NC+ZPAK media
ERP115407Sperm DNA damage causes genomic instability in early embryonic development
ERP115408Reverse taxonomy of nematodes associated to Rhynchophorus ferrugineus
ERP115409Automatic upload of a(n) Escherichia coli isolate, strain: 802802004.
ERP115410Mouse-Toxoplasma Behavior - RNASeq
ERP115411A link between the newly described colistin resistance gene mcr-9 and Enterobacteriaceae clinical isolates carrying blaSHV-12 from horses in Sweden
ERP115412Host genetic determinants of the gut microbiota of wild mice
ERP115413Identification of drug-resistance determinants in a clinical isolate of Pseudomonas aeruginosa by high-density transposon mutagenesis
ERP115414RNA-seq of human pluripotent cells with ancient ADSL
ERP115415We use genome-resolved metagenomics to build up an ecological model of SRMs in a lab-scale light-blocking methanogenic bioreactor system (ZVS-SR bioreactor) with stable operation for more than 400 days.
ERP115416Discover new allele of HLA-DRB1*11 in Taiwan
ERP115417Analysis of the fitness cost of five CTX-M-plasmids (IncF and IncA/C type) in J53-2 E. coli strain, using in vitro experimental evolution and whole genomic sequencing
ERP115418Genomic traits in Staphylococcus epidermidis associated with prosthetic joint infections - a molecular epidemiology study
ERP115419Evolution of parthenogenesis in Panagrolaimus nematodes
ERP115420RNA-Seq of modern Beijing and ancient Beijing strains
ERP115421Analysis of the fitness cost of five CTX-M-plasmids (IncF and IncA/C type) in J53-2 E. coli strain, using in vitro experimental evolution and whole genomic sequencing
ERP115426Arabidopsis col-0 WT strand-specific RNA-Seq data from poly-A pulldown
ERP115427whole-genome sequencing analysis of Salmonella isolated from China
ERP115428Lactobacilli have a niche in the human nose.
ERP115430Chitinophaga vietnamensis genome
ERP115431Chitinophaga vietnamensis genome
ERP115432Whole-exome sequencing of genomic DNA from patient-derived melanoma cell lines resistant to either vemurafenib (PLX) or trametinib (TRA).
ERP115433RNAi targeting ZC3H20 in differentiating EATRO1125 Trypanosoma brucei
ERP115434Bindingof ZC3H20 and ZC3H21 to RNA
ERP115437RNAi targeting both ZC3H20 and ZC3H21 in procyclic-form Lister427 Trypanosoma brucei
ERP115439Streptopelia turtur (European turtle dove)
ERP115440Streptopelia turtur (European turtle dove)
ERP115442Pteropus giganteus (also known as P.medius) Genome sequencing and assembly
ERP115443First occurrence of Sugarcane Streak Mosaic Virus (SCSMV) infecting Sugarcane in Côte d'Ivoire, West Africa
ERP115445Whole shotgun metagenomic sequencing for 1,004 individuals belonging to the TwinsUK cohort. Supporting data for: Visconti et al, Interplay between the human gut microbiome and host metabolism
ERP115446Trial B 2019
ERP115448Global transcriptional response of Aspergillus niger to blocked active citrate export through deletion of the exporter gene.
ERP115449First occurrence of Sugarcane Streak Mosaic Virus (SCSMV) infecting Sugarcane in Côte d'Ivoire, West Africa
ERP115450Identification of new QTL for salt tolerance from rice variety Pokkali
ERP115451Changes in oral microbial ecology of C57Bl6 mice associated with sampling methodology and aging
ERP115452Microcaecilia unicolor (tiny Cayenne caecilian) genome assembly, aMicUni1
ERP115453Microcaecilia unicolor (tiny Cayenne caecilian)
ERP115455Syngnathus acus (greater pipefish)
ERP115456Syngnathus acus (greater pipefish)
ERP115457Genetic variation within and among genomes and populations of Strongyloides rati
ERP115458Vertical transmission of a nematode from female lizards to the brains of their offspring
ERP115459UKMENCAR5 Neisseria carriage study
ERP115461Acquisition of somatic activating mutations in the vegf-pathway in cardiac angiosarcomas
ERP115464A Minimally Destructive Protocol for DNA Extraction from Ancient Teeth
ERP115465Human Auditory Ossicles as an Alternative Optimal Source of Ancient DNA
ERP115466EMG produced TPA metagenomics assembly of the PRJNA413474 data set (MTR skin microbiome).
ERP115467EMG produced TPA metagenomics assembly of the PRJNA413474 data set (MTR skin microbiome).
ERP115468EMG produced TPA metagenomics assembly of the PRJNA413474 data set (MTR skin microbiome).
ERP115469Effect of culture medium on taxonomic diversity of phyllospheric bacteria isolated from Hedera helix leaves
ERP115470EMG produced TPA metagenomics assembly of the PRJNA413474 data set (MTR skin microbiome).
ERP115471EMG produced TPA metagenomics assembly of the PRJNA413474 data set (MTR skin microbiome).
ERP115472EMG produced TPA metagenomics assembly of the PRJNA413474 data set (MTR skin microbiome).
ERP115473EMG produced TPA metagenomics assembly of the PRJNA413474 data set (MTR skin microbiome).
ERP115474Genomic analysis on broiler-associated Clostridium perfringens strains
ERP115475Editing of the gut microbiota reduces carcinogenesis in mouse models of colitis-associated colorectal cancer
ERP115476iMSMS Baranzini data
ERP115477Gut-microbiota specific IgA B cells traffic to the CNS in multiple sclerosis
ERP115478Shifts in the genetic landscape of the western Eurasian Steppe associated with the beginning and end of the Scythian dominance
ERP115479CDI in Thailand and Malaysia
ERP115480Whole-genome re-sequencing of Pseudomonas aeruginosa PAO1 after antibiotic exposure
ERP115481Potential roles of gut microbiome commensals & metabolites in modulation of murine ALS
ERP115482Cotter lab CS study
ERP115483Transition of microbial communities and degradation pathways in anaerobic digestion at decreasing retention time
ERP115486Use of whole-genome sequencing of Vibrio cholerae O1 isolates to assist the epidemiological investigation of a cholera outbreak in Zimbabwe, 2018
ERP115487The porcine adrenal cortex transcriptome reads obtained from eight RNA-seq libraries: 4 untreated samples (CTR) and 4 samples administrated by LPS from Salmonella Enteritidis (LPS)
ERP115488Differences exist in the faecal microbiota of domesticated equines
ERP115489Phylogenomic Assessment of Drug-Resistant Mycobacterium tuberculosis Strains from Beira, Mozambique
ERP115490Infection-induced anorexia and the gut microbiota
ERP115493Microbial communities in oil seeps from the Gulf of Mexico
ERP115495Fusarium volatile, a new potential pathogen from a human respiratory sample
ERP115496Cultivar-dependent variation of the cotton rhizosphere and endosphere microbiome under field conditions
ERP115497Investigating host-microbiome interactions by droplet based microfluidics
ERP115500Central storage of sequence reads of SUISAG samples for controlled access by reasearch institutes.
ERP115501Nanopore Direct RNA Sequencing Maps the Arabidopsis m6A Epitranscriptome
ERP115502Exploring Fronts With Multiple Robots – Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018
ERP115505A20 expression in dendritic cells restrains intestinal defensin expression and preserves commensal homeostasis
ERP115507The genomic ancestry of the Scandinavian Battle Axe culture and its relation to the broader Corded Ware horizon
ERP115508Metagenomics of symbiotic bathmodiolin mussels
ERP115509Metatranscriptomics of symbiotic bathmodiolin mussels
ERP115510Feline disseminated cutaneous phaeohyphomycosis due to Exophiala spinifera
ERP115511The reduction of dextran sulfate sodium-induced colitis severity in mice exposed to cigarette smoke is accompanied by specific gene pathway and microbial shifts
ERP115512DNA methylation in canine brains is related to domestication and dog-breed formation
ERP115513As part of this study, we performed an evolution experiment where we selected for colony spreading in eight Bacilli strains and species.
ERP115514A new blueprint of medullary thymic epithelial cells of the Aire lineage
ERP115515Distinct microbiome composition and metabolome exists across subgroups of elite Irish athletes irrespective of diet
ERP115516Individual sequencing of Chironomus riparius submitted to temperature variations
ERP115517Laboratory surveillance of Aedes (Stegomyia) albopictus in Portugal
ERP115518Honey bee waggle dance communication increases diversity of pollen diets in intensively managed agricultural landscapes
ERP115519Two multi-fragment recombination events originated the ß-lactam-resistant serotype 11A-ST6521 related to Spain9V-ST156 pneumococcal clone that is spreading in Southwest Europe
ERP115520Metagenomic analysis of the effects of toll-like receptors on bacterial infection in the peritoneal cavity following cecum ligation and puncture in mice
ERP115521Quantification and genome-wide mapping of DNA hydroxymethylation reveal transcription regulation networks and prognostic signatures in multiple myeloma
ERP115523Three years of microbiome data from bulk soil and rhizosphere at two apple orchards in the UK
ERP115524We investigated at two time points a longitudinal cohort of 27 untreated Chronic Lymphocytic Leukemia (CLL) patients with either stable or progressive disease. The sequenced genes included BCOR, EGR2, HIST1H1E, ITPKB, KRAS, MED12, NRAS, RIPK1, SAMHD1, ATM, BIRC3, BRAF, CHD2, DDX3X, DDX3Y, FBXW7, KIT, KLHL6, MAPK1, MYD88, NOTCH1, PIK3CA, POT1, SF3B1, TP53, XPO1 and ZMYM3, which were previously identified as mutated in CLL studies.
ERP115525Development of a Reference Data Set for Assigning Streptococcus and Enterococcus Species Based on Next Generation Sequencing of the 16S-23S rRNA Region
ERP115526GG3 - Genome sequencing of bacteria in undergraduate classes
ERP115527Using a custom capture panel designed for the 610 human tRNAs (as annotated in GtRNAdb), DNA containing tRNA-encoding genes was isolated from 84 individuals and sequenced.
ERP115528Discover new allele of HLA C*07 in Taiwan
ERP115530rat gut microbiome
ERP115531Molecular Biodiversity of Iranian Persian Gulf Sponges
ERP115532Lignocellulose associated salt marsh microbiome enrichment on spartina anglica biomass for 16 weeks.
ERP115533Antigenic cartography of immune responses to Recombinant DBLa tags from Plasmodium falciparum erythrocyte membrane protein 1 (PfEMP1).
ERP115534Full length HLA sequencing of cell lines to provide the histocompatibility and immunogenetics field with ultra-high resolution typing of vital reference sources.
ERP115535dsRNA uptake in Caenorhabditis elegans
ERP115536Presence of bacterial infection in brains of patients with Huntington's disease
ERP115540Whole genome sequencing of Lactobacillus paracasei INIA P272
ERP115541Reference genome assembly for Infravec Anopheles atroparvus EBRE strain assembly
ERP115542Whole genome sequencing of Lactobacillus rhamnosus INIA P344
ERP115543Whole genome sequencing of Lactobacillus mucosae INIA P508
ERP115544Whole genome sequencing of Lactobacillus rhamnosus INIA P540
ERP115545Whole genome sequencing of Lactobacillus reuteri INIA P572
ERP115546Whole genome sequencing of Bifidobacterium breve INIA P734
ERP115548ChIP-Seq of Cluster situated regulators (ForJ, ForF and ForZ) of the formicamycin BGC in Streptomyces formicae
ERP115549RNA-Seq of murine trisomic B cell precursors expressing KRAS_G12D
ERP115550Gamma radiation induces Life stage-dependent reprotoxicity in Caenorhabditis elegans via impairment of spermatogenesis
ERP115551Transcriptome analysis of human brain microvascular endothelial cells response to Neisseria meningitidis and its antigen MafA using RNA-seq
ERP115554Enzymatic alpha-amidation system in scorpion venom glands
ERP115555Wild primate microbiomes prevent obesity in germ-free mice
ERP115558RNAseq of Lachancea kluyveri recombined strains for expression QTL analysis.
ERP115560Characterization of Dystrophin expressing mesoangioblasts fate after their transplantation in dystrophic muscles. Identification of differentiation lineages of mesoangioblasts upon transplantation. Discovery of signaling pathways improving their capacity to differentiate toward myogenic lineage.
ERP115563Characterization of miRNAs distribution in cynomolgus macaque genome using small RNA sequencing
ERP115564Effect of cytokine treatment on mouse T helper cells
ERP115566Overexpression of RORA in primary mouse in vitro Th2
ERP115567RNA-seq of human near-haploid cell line HAP1 with CRISPR-edited frameshift mutations
ERP115568Whole genome sequencing of Methylobacterium dankookense SW08-7
ERP115569RNA-seq of NOMO-1 cell line
ERP115570RNA-seq of hypothalamus from Zrsr1 WT and Zrsr1 mutant mice.
ERP115571Array-CGH analysis of a patient with triphalangeal thumb-polysyndactyly syndrome combined with a complex congenital heart defect and optic disc coloboma
ERP115572Single cell transcriptomic profiles of CREBBP wild-type and mutant cell models
ERP115573New Plectosphaerellaceous species from Dutch garden soil
ERP115574Parallel clines in a quantitative trait in two mimetic butterfly species despite different levels of genomic divergence and selection
ERP115577Transcriptome data of oak bud development from dormant buds to mature leaves
ERP115581Yeast and bacterial inoculation practices influence the microbial communities and sensory profiles of barrel-fermented Chardonnay wines
ERP115582Strain identification of SYt1
ERP115583Transcriptome profiling of corpus luteum (CL) and endometrium during early pregnancy in Finnsheep, Texel and their F1-crosses.
ERP115584Fungicides and the grapevine wood mycobiome. A case study on tracheomycotic ascomycete Phaeomoniella chlamydospora reveals potential for two novel control strategies.
ERP115585Estuarine meiobenthic community diversity
ERP115587Pathogen detected by mNGS
ERP115588EMG produced TPA metagenomics assembly of the PRJNA61259 data set (Oral and Stool Bacterial Sequencing).
ERP115589EMG produced TPA metagenomics assembly of the PRJNA61259 data set (Oral and Stool Bacterial Sequencing).
ERP115591Identification of CaMKII-dependent H3S28p target genes
ERP115592Metagenomic Nanopore sequencing of influenza virus direct from clinical respiratory samples
ERP115593Comprehensive Profiling of Primary and Metastatic ccRCC Reveals a High Homology of the Metastases to a Subregion of the Primary Tumour
ERP115594Carbapenem resistant Klebsiella sp. Slovenian isolates
ERP115595Concordance of SNP- and allele-based typing workflows in the context of a large-scale international Salmonella Enteritidis outbreak investigation
ERP115596High quality variant calls from mutliple dog genome project - Run2
ERP115598RNA-seq of liver samples from adult Ryukyu mice (Mus caroli)
ERP115600Single cell RNA sequecing analysis of mouse resident and infiltrating immune cells during acute kidney injury and fibrosis
ERP115601GBS sequencing of corn snakes
ERP115602ChIP-seq analyses of CTCF binding in liver samples from CAST/EiJ and SPRET/EiJ (Mus spretus) mice, and of the cohesin subunit RAD21 in C57BL/6J mouse liver
ERP115603RNAseq analysis of early touch responses in myc234 mutants in Arabidopsis
ERP115604Enterovirus D68 whole-genome analysis
ERP115606Epidemiology of staphylococci IIII
ERP115607Evaluation of gut bacterial community composition from Saudi Female population
ERP115608Sequencing of Streptomyces albus S4 ?5 and Streptomyces antibioticus NRRL 8167
ERP115609Cryptosporidium from calves
ERP115610Analysis of Saudi Women Gut Microbiota Metagenomic
ERP115611Microbes in springs in Iceland
ERP115612The human microbiome correlates with risk factors for cardiometabolic disease across an epidemiologic transition
ERP115617Exploring Listeria monocytogenes transcriptomes in correlation with divergence of lineages and virulence measured in Galleria mellonella
ERP115620Error profile of the DNA storage channel
ERP115622Gastrointestinal microbiota and immune cells interact closely and display regional specificity, but little is known about how these communities change with location.
ERP115624Cyanobacteria have been shown recently to produce methane independent of external methylated precursors. Here we conducted a transcriptomic experiment over 24h to identify genes expressed in relation to methane production.
ERP115625The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs) linked to reconstructed full-length 16S rRNA gene sequences
ERP115626Genome assembly of the Apicomplexan parasite Hepatocystis from a Piliocolobus blood sample
ERP115631A western-type diet predisposes mice to lethal sepsis following surgical injury with dissemination of multi-drug resistant pathobionts from among the intestinal microbiota
ERP115632Mice fed an obesogenic western diet, administered antibiotics and subjected to a sterile surgical procedure develop lethal septicemia with multi-drug resistant pathobionts.
ERP115633Epidemiology of staphylococci III
ERP115635RNA stable isotope probing in A. echinatior ants
ERP115637An integrated approach to profile lung tumor endothelial cell heterogeneity across species and models and to identify angiogenic candidates
ERP115638Dual RNA sequencing of A. echinatior leafcutter ant laterocervical plates to establish secondary metabolite production by Pseudonocardia symbionts in vivo.
ERP115639Expression profiling of Eµ-Myc-driven lymphomas using a reversible switchable p53 allele modeling early and late stage p53 inactivation.
ERP115640Amplicon sequencing of 60 coral samples from Papua New Guinea
ERP115642Metagenomic monitoring of freshwater resources with long-read real-time sequencing - basecaller: Albacore
ERP115643Environmental samples from a genomic characterization of Carbapenem-non-susceptible Pseudomonas aeruginosa strains from two ICUs from the referral national hospital in Jakarta, Indonesia.
ERP115645Taxonomic status of the extinct Canary Islands Oystercatcher Haematopus meadewaldoi
ERP115646Epidemiology of staphylococci I
ERP115647ChIP_seq of Gaf1-GFP S. pombe cells w/o Torin1 in YES
ERP115650Male and female gametogenesis in the kelp Saccharina latissima (Laminariales, Laminariaceae)
ERP115651Single-cell RNA sequencing of human steady-state immune cells from the lamina propria of colon and matching mesenteric lymph nodes
ERP115652Targeted resequencing of human colorectal cancer (CRC) stem-like cells (CCSCs), stem-like circulating tumor cells (cCCSCs) and metastatic colorectal stem cells (mCCSCs).
ERP115654The gut microbiome from Infants who were exposed in utero to Hurricane Maria in San Juan, Puerto Rico
ERP115655metagenome sequences
ERP115656Comprehensive analysis and comparison of protein, carbohydrate, polyhydroxybutyrate and fatty acid composition of four methanotrophic populations
ERP115658Corrosion and biofouling tendency of carbon steel in anoxic groundwater containing Sulphate Reducing Bacteria and Methanogenic Archaea
ERP115659Arabinoxylan-Oligosaccharide Intake changes the microbiota and softens stool consistency without changes in gut transit and metabolic health in healthy adults
ERP115660Gut microbiota, motor functions and risk and prodromal markers of Parkinson's disease
ERP115662Dynamics of transcription during the coenocytic cycle of Sphaeroforma arctica
ERP115664Genomic analysis of 4NQO-induced mouse oral squamous cell carcinomas
ERP115665The impact of storage conditions on human stool 16S rRNA microbiome composition and diversity
ERP115666Root-associated bacterial and fungal communities
ERP115668Rapid identification of inflorescence type markers by genotyping-by-sequencing of diploid and triploid F1 plants of Hydrangea macrophylla
ERP115669Formaldehyde-Assisted Isolation of Open Chromatin Spots Novel Regulators of Systemic Acquired Resistance in Arabidopsis
ERP115670Interactions between the gut microbiome and mucosal immunoglobulins A, M and G in the developing infant gut
ERP115671whole genome shallow sequencing of ctDNA from pediatric solid tumors
ERP115673Genomic alterations in Burkholderia vietnamiensis strain G4 exposed to sub-lethal concentrations of ethylzingerone identified by whole-genome sequencing analysis.
ERP115674Combined microRNA and mRNA expression analysis in pediatric multiple sclerosis: an integrated approach to uncover novel pathogenic mechanisms of the disease.
ERP115675Metagenomes of the Altantic Ocean collected during the Piratas XIII expedition.
ERP115676Influence of temperature on microbial community structure of stored rainwater
ERP115677Escherichia coli belonging to ST131 rarely transfers blactx-m-15 to fecal Escherichia coli isolates
ERP115679Phylogenetic lineages and the role of hybridization as driving force of evolution in grass supertribe Poodae
ERP115681Laboratory surveillance of Toxoplasma gondii in Portugal
ERP115682Single-cell transcriptional profiling of induced reprogramming trajectories
ERP115683Here, we applied a greenhouse experiment to assess the impact of different nitrogen sources (control without fertilization, NPK, and microalgae biofertilizer) on active soil microbiomes (bacteria and protists) in different time points targeting different plant development stages to access the rhizosphere and its surrounding.
ERP115688Cross-transmission of MDR-TB in Kuwait
ERP115689We reported genome-wide DNase I-hypersensitive site (DHS) maps from diverse tissues (leaf, stem, and root) in the three grasses
ERP115690Distribution of Antibiotic Resistance Genes and Bacteria from six Atmospheric Environments
ERP115691Biochemical and structural characterization of a highly active branched-chain amino acid aminotransferase from Pseudomonas sp. for efficient biosynthesis of chiral amino acids
ERP115692Portunus trituberculatus Genetic map
ERP115693Rhizoremediation of mixed contaminated soil using Brassica napus and a bacterial consortium
ERP115694Environmental long read amplicons of soil fungi across Podzol soil profile
ERP115695Impact of gut microbiota on m6A/m epitranscriptomic mRNA modification in different host tissues
ERP115696The impact of XAB2 on gene expression and pre-mRNA splicing
ERP115697XAB2 binds genome-wide on putative DNA elements (e.g. enhancers, promoters) that are known to regulate gene expression
ERP115698Assessing the impact of XAB2 on gene expression and pre-mRNA splicing
ERP115699Adaptive laboratory evolution reveals general and specific chemical tolerance mechanisms and enhances biochemical production
ERP115700MicroRNAs Profile of HCV Spontaneous Clarified Individuals, Denotes Previous HCV Infection
ERP115701RNA-seq of blood samples from bovines immunized with a multicomponent recombinant vaccine against cattle tick.
ERP115702RNAseq on touch-treated Arabidopsis thaliana plants
ERP115703Comparison of thymic mTEC cells from MyD88fl/fl x Foxn1Cre and MyD88fl/fl mice by transcription profiling
ERP115704Transcription profiling by sequencing of murine MyD88 -/- and MyD88 +/+ mTECs stimulated with a TLR9 ligand
ERP115705RNA-Seq of zebrafish embryos with wdr37 missense variant compared to wild type
ERP115706Fetal androgen exposure determines adult male health
ERP115707RNA-seq of whole mouse placentas at E10.5 comparing C57Bl/6 male conceptuses that had undergone blastocyst transfer to non-transferred C57Bl/6 male conceptuses
ERP115708Dominant Microbial populations in Vermiculations of Morgana Cave, Central Italian Alps
ERP115710The protective effect of inflammatory monocytes during systemic C. albicans infection is dependent on collaboration between C-type lectin-like receptors
ERP115711Pervasive, non-functional translation in mycobacterium tuberculosis
ERP115712RNAseq of 16 North American Beaver (Castor canadensis) tissues
ERP115713RNA-seq comparison of fibro-adipogenic progenitors (FAPs) from wild type, mdx and cardiotoxin-injured mice
ERP115717Ribosome profiling of astrovirus-infected cells
ERP115718Archaeospora ecuadoriana sp. nov. from a mountainous biodiversity hotspot area in Ecuador, and transfer of Palaeospora spainiae to Archaeospora, as A. spainiae comb. nov.
ERP115719Transcriptional profiling of induced reprogramming trajectories
ERP115720Bacterial communities of the earthworm Eisenia fetida fed with cow manure and brewers spent grains
ERP115721Beta-glucan is a major growth substrate for human gut bacteria related to Coprococcus eutactus
ERP115722Targeted next-generation sequencing in children with intellectual disabilities, autism spectrum disorders and multiple congenital abnormalities
ERP115723Genome analysis reveals genetic admixture and signature of selection for productivity and environmental traits in Iraqi cattle
ERP115724Genome resequencing for mutation identification beneficial to muconic acid production in Saccharomyces cerevisiae
ERP115733Transposons played a major role in the diversification between the closely related almond (Prunus dulcis) and peach (P. persica) genomes: Results from the almond genome sequence
ERP115734Single-cell ATAC-seq of chimpanzee cerebral organoids
ERP115735Genome resequencing of a engineered Saccharomyces cerevisiae strain ST8424 and its UV mutant for the beneficial mutations for improved muconic acid production.
ERP115738Mir142 loss unlocks IDH2R140-dependent leukemogenesis through antagonistic regulation of HOX genes
ERP115739RNA-Seq of the aorta of hypercholesterolemic mice treated by either ticagrelor, clopidogrel, or control.
ERP115740RNA-Seq of the liver of hypercholesterolemic mice treated by either ticagrelor, clopidogrel, or control.
ERP115742RNA-seq of C. elegans adults and embryos exposed to P. vranovensis, P. aeruginosa, P. luminescens or wdr-23 mutant embryos.
ERP115744Transposons played a major role in the diversification between the closely related almond (Prunus dulcis) and peach (P. persica) genomes: Results from the almond genome sequence.
ERP115749Synthetic microbiota reveal priority effects and keystone strains in the Arabidopsis phyllosphere
ERP115750Transcriptional profiling of human macrophages during infection with Bordetella pertussis.
ERP115752Portunus trituberculatus genome survey
ERP1157531, 3-Dicaffeoylquinic acid targeting 14-3-3 t suppresses human breast cancer cell proliferation and metastasis through IL6/JAK2/PI3K pathway
ERP115754Interactions between earliest Linearbandkeramik farmers and central European hunter gatherers at the dawn of European Neolithization
ERP115756Typing of clinical E. cloacae complex isolates by FTIR spectroscopy
ERP115757Microbial community structure associated with submarine groundwater discharge
ERP115758Transcriptome analysis of human brain microvascular endothelial cells response to Borrelia burgdorferi and its antigen Erp23 using RNA-seq
ERP115759Genetic diversity and spatial segregation of Francisella tularensis subsp. holarctica in Germany
ERP115760Give a Dog a Genome
ERP115761Physical fitness in community dwelling older adults is linked to dietary intake, gut microbiota and metabolomic signatures
ERP115762Determining metabolic dependencies in Cellulose-degrading Consortia
ERP115763Diversity analysis of Planctobacteria from different regions of India
ERP115764Diversity analysis of Planctobacteria from different regions of India
ERP115765Raw sequencing reads for Chlamydomonas reinhardtii field isolates sampled from North Carolina in 1991 (CC-3268) and Quebec in 2016 (GB13, GB57, GB66, GB117, GB119, GB123, GB138, GB141).
ERP115766Human gut microbiome
ERP115767Genome Analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain UPM 260
ERP115768Barcode17 filter 16SrRNA
ERP115769Re-discovery of Trichophyton bullosum in the North Africa as a cause of severe dermatophytosis in donkeys
ERP115770Dengue virus diversity in Tamil Nadu, India
ERP115771Malnourishment leads to severe gut microbiota changes in a piglet model of childhood malnutrition, which can be partly restored during 3 weeks of refeeding with fortified Corn-Soy-Blend
ERP115772Transcriptome analysis of human brain microvascular endothelial cells response to Streptococcus pneumoniae and its antigen Adhesion lipoprotein using RNA-seq
ERP115773Healthy human lung microbiome from 15 volunteers
ERP115774Transcriptome analysis of human brain microvascular endothelial cells response to interactive DIII domain of protein E of WNV and interactive DIII domain of protein E of TBEV using RNA-seq
ERP115776Single nucleotide polymorphisms and linkage disequilibrium analysis of three HSP90 family genes in cattle
ERP115777Cold inducible genes and promoters in Chinese Hamster Ovary cells were identified by analyzing transcriptome data of cultivation before and after temperature shift from 37 to 33°C
ERP115778Genome-wide analysis of population structure and adaptation of Plasmodium knowlesi in peninsular Malaysia
ERP115780Siderophore piracy as a resilience factor for Bacteroidetes during enteric pathogen infection
ERP115782ARS2/MAGL signaling in glioblastoma stem cells promotes self-renewal and M2-like polarization of tumor-associated macrophage
ERP115784Y-chromosome sequences from 17 ethnolinguistic groups of Vietnam
ERP115785Alpine headwaters fed by permafrost thaw and glacial melt host different bacterial communities: possible ecological implication for the future
ERP115786Taxonomic Reference Set Of ITSoneDB Data
ERP115787Fecal microbiota transplantation to maintain remission in Crohn's disease : a pilot randomized controlled study
ERP115788Environmental selection shapes the formation of groundwater microbiomes
ERP115790A new species of Streblospio (Polychaeta: Spionidae) from the Adriatic Sea (eastern Mediterranean Sea)
ERP115791Dominant Microbial populations in Vermiculations of Morgana Cave, Central Italian Alps
ERP11579316S rRNA amplicon sequencing of broiler caecal contents
ERP115795AMIGA maize - Assessing and monitoring impacts of genetically modified maize on agro-ecosystems
ERP115796Environmental change affecting COastal ecosystems of tropical China during the Anthropocene: Landward vs OCeanic influence. Subproject 5: Diversity and relative abundance of Vibrios in aquacultures and adjacent coastal systems of Hainan Island (China)
ERP115797Cell fusing agent virus isolation from Aedes aegypti from Thailand
ERP115799Estrogen receptor ß role in tumour suppression of triple negative breast cancer
ERP115800Complete genome sequence of Lake Sinai virus 1 and Lake sinai virus 2 affected honey bees in southern Italy
ERP115801WGS analysis of a set of QREC isolates from animal sources in Norway
ERP115802Selection upon Wolbachia-mediated dengue virus blocking in Aedes aegypti
ERP115803Whole exome sequencing of CRC cell lines, in vitro and in vivo, to track longitudinally genomic profiles, clonal evolution, mutational signatures, and predicted neoantigens.
ERP115807WGS analysis of a set of QREC isolates from broilers in Norway
ERP115808Microbial production of the off-flavour geosmin in tilapia production in Brazilian water reservoirs: Importance of bacteria in the intestine and other fish-associated environments
ERP115809Microbial Similarity Between Students in a Common Dormitory Environment Reveals the Forensic Potential of Individual Microbiome Signatures
ERP115810The mitochondrial intergenic regions nad1-cob and cob-rps3 as molecular identification tools for pathogenic members of the genus Cryptococcus
ERP115811Microbiome-derived aryl hydrocarbon receptor ligands ameliorate intestinal inflammation in mice
ERP115813Species Divergence in Iris SeriesSibiricae
ERP115814Species Divergence in Iris SeriesSibiricae
ERP115815Brown trout RNA-seq, eight tissues, from female haploid sample
ERP115816Estrogen receptor ß role in tumour suppression of triple negative breast cancer - ChIPseq experiment
ERP115817Identification of antigens presented by MHC for vaccines against tuberculosis
ERP115818Salmonella Dublin isolated from humans in Denmark between 2014 and 2016
ERP115822Study of long term N addition effect on soil microbial communities within Gardsjon lake catchment
ERP115823Comprehensive transcriptomic and epigenomic analysis of the genetically-defined pigs predisposed to colorectal cancer.
ERP115825PUF3 RNAi in bloodstream-form of Trypanosoma brucei
ERP115826Genome-wide association study for Phaseolus vulgaris breeding traits
ERP11582716S rRNA sequencing of sputum from individuals with CF and non-CF bronchiectasis with underlying fungal disease.
ERP115828High-throughput isolation and culture of human gut bacteria with droplet microfluidics
ERP115829Population genomics of common carp
ERP115830RADseq of progeny tetrads from strain FY-Tecc-msh2-1, set A
ERP115831Sequencing of the common strain of Campylobacter jejuni NCTC11168 across various laboratories to assess the accumulation of variation.
ERP115832The survival of Paramecium tetraurelia strain d12 under stress condition by sexual reproduction
ERP115833Core resistome disseminating from hospital wastewater to aquatic environmental revealed by shotgun metagenomics
ERP115834A longitudinal field trial to assess the temporal dynamics of fecal microbiota in milk-fed calves and the impact of antibiotic treatment
ERP115835PRM1 gene of chromasome 25 of Bos taurus
ERP115836Early-Onset Preeclampsia Is Associated With Gut Microbial Alterations in Antepartum and Postpartum Women
ERP115838Phytoplankton succession patterns German Bight
ERP115840Apoptotic cell exclusion and bias-free single-cell selection are important QC requirements for successful single-cell sequencing applications
ERP115841Sow's birth canal and gut microbiota
ERP115842Whole genome shotgun data from dairy catttle
ERP115843Novel lncRNA lncFAM200B: molecular characteristics and effects of genetic variants on promoter activity and cattle body measurement traits
ERP115845Analysis of thymic dendritic cells (DCs) subtypes from Foxn1cre x ROSA26TdTOMATO mice by single cell transcription profiling.
ERP115846Wadden Sea marine benthic metabarcoding 18S
ERP115848Search for UV radiation resistance strategies in Deinococcus swuensis isolated from Paramo.
ERP115849Sow's birth canal and gut microbiota
ERP115850Exploring the potential of comparative de novo transcriptomics to classify Saccharomyces brewing yeasts
ERP115851B cell humoral response and differentiation is regulated by non-canonical poly(A) polymerase TENT5C.
ERP115853RNA-seq of CK2alpha-silenced H9-c2 derived myoblasts using siRNA or doxycyclin inducible shRNA.
ERP115854RNA-seq of Trypanosoma brucei polysomes in response to ZC3H5 RNAi knockdown
ERP115855PUF3 RIP and rRNA depletion control
ERP115858Transcriptional analysis of regulatory effects in Corynebacterium glutamicum and a derived (p)ppGpp0 mutant strain
ERP115859Global gene transcription analysis in response to changes in chromosome supercoiling in Streptomyces coelicolor
ERP115861Coregonus sp. 'balchen' genome assembly - De-Kayne, Zoller and Feulner
ERP115863Colonbiome pilot: 9 stools, sequenced by shotgun
ERP115864Phylogeographic evidence that the distribution of cryptic euryhaline species in the Gambusia punctata species group in Cuba was shaped by the archipelago geological history
ERP115865Diversity and Phylogeny of fungi
ERP115866sow's birth canal and gut microbiota
ERP115867sow's birth canal and gut microbiota
ERP115872Microbial thermophiles community
ERP115873Towards a plant model for enigmatic U-to-C RNA editing: the organelle genomes, transcriptomes, editomes and candidate RNA editing factors in the hornwort Anthoceros agrestis
ERP115874Evaluation of bacteriome and mycobiome in patients with acute vulvovaginal candidiasis before, during and after treatment with a gel containing a Lactobacillus mixture
ERP115877RNAseq data of Puccinia striiformis f.sp. tritici collected in 2018 in Zimbabwe
ERP115878Sequencing Rat Pak1 Exons
ERP115879Sheep requencing in CAAC
ERP115880NGS of LitX family
ERP115881Genome-wide SNP analysis using 2b-RAD sequencing identifies the candidate genes putatively associated with hair length in Tianzhu white yak (Bos grunniens)
ERP115882Faecal microbial profiles of sheep infected by Teladorsagia circumcincta
ERP115883Epidemiology of staphylococci II
ERP115885RNAseq of 6 Different Rat Brain Areas after Treatment with a GLP-1 Receptor Agonist
ERP115886complete genome sequencing of a Dyadobacter species, isolated from a freshwater biofilm
ERP115887Patterns of Oral Microbiota Diversity in Adults and Children: A Crowdsourced Population Study
ERP115888A link to the past: mapping co-ancestry connections between a Medieval and modern European genomes
ERP115889Pineapple genome
ERP115890Bacterial community study using 16rRNA sequencing
ERP115892RNA-seq of Arabidopsis Col-0, snrk2.4, double snrk2.4/2.10 and quintuple snrk2.1/2.4/2.5/2.9/2.10 mutants from control (0mM) and salt stress (150mM NaCl for 1hour) treatment.
ERP115896Neolithic Pitted Ware culture on Gotland
ERP115897A new mutation in exon 12 of ITGB3 gene
ERP115898Shotgun sequencing and analysis of the extinct Conuropsis carolinensis (Carolina parakeet)
ERP115899Mycobacterium abscessus genomes
ERP115900Nanohaloarchaeota from Dallol microbiome samples
ERP115901Genome Sequence of 'Candidatus Enorma burkinafasoiensis' Marseille- P9525
ERP115902Culturomics project
ERP115903Environmental determinants of distribution of planktonic diplonemids and kinetoplastids in the oceans
ERP115905Copy number variation (CNV) analysis in Gallstones disease (GSD)
ERP115906Interpretation of gut microbiome composition in type 2 diabetic subjects of North China
ERP115907Transposon Insertion Sequencing to eastablish the fitness landscape of the African Salmonella Typhimurium ST313 strain D23580
ERP115908RNA-seq of nine oil palm individuals with different vitamin E content
ERP115909Already too late? Massive trade in Indian star tortoises (Geochelone elegans) might have wiped out its phylogeographic differentiation
ERP115912The effect of local extinction and recolonization on nuclear relative to mitochondrial population structure with an application to multi-genomic SNP variation in the red flour beetle, Tribolium castaneum
ERP115913Diversity analysis of Genus Rhodobacter
ERP115914Gut microbiota of calves (16S rRNA profiling), treated or untreated with florfenicol.
ERP115915Gut microbiota of calves (whole meta-genome shotgun sequencing), treated or untreated with florfenicol.
ERP115916The complete genome sequence of "Hydrothermobacter metallireducens" type strain V6Fe1, a novel thermophilic anaerobic bacterium member of the Deferribacteraceae family.
ERP115918Single cell RNA-seq of in vitro cultured human embryos
ERP115919Anopheles funestus pooled template whole genome sequencing of field-collected mosquitoes (from Democratic Republic of Congo and Mozambique).
ERP115920Linking omics and ecology to dissect interactions between the apple proliferation phytoplasma and its psyllid vector Cacopsylla melanoneura
ERP115922Stick or leave – pushing methanogens to biofilm formation for ex situ biomethanation
ERP115923Genome assembly of the Aratinga solstitialis
ERP115924Comparative whole genome phylogeny of animal, environmental and human strains confirms the genogroups organization and the diversity of Stenotrophomonas maltophilia
ERP115925Draparnaldia (chlorophytes), an emerging model for comparative analyses with basal streptophytes
ERP115926Metagenomic analysis of the effects of toll-like receptors on bacterial infection in the peritoneal cavity following cecum ligation and puncture in mice
ERP115927mRNA and protein single cell analysis in a dynamic cellular system using SPARC
ERP115928High quality assembly and transcriptome of the European barn owl (Tyto alba alba).
ERP115929Molecular identification of a Microhyla heymonsi population distributed in Majiang, Guizhou province in China
ERP115930Bartonella massiliensis genome
ERP115931Protists in decomposing beech-leaf litter
ERP115932EMG produced TPA metagenomics assembly of the PRJNA479434 data set (NRC/UOttawa - Peace Athabasca Delta Raw sequence reads).
ERP115933Chitinophaga polysaccharea CSUR P9684
ERP115934Genomic characterization and outcome of Prosthetic Joint Infections caused by Staphylococcus aureus
ERP115935Phased nucleotide inserts for sequencing low-diversity RNA samples from in vitro selection experiments
ERP115936Buttiauxella agrestis genome
ERP115937Chitinophaga vietnamensis genome
ERP115938Chitinophaga vietnamensis genome
ERP115940RNA-seq of Drosophila melanogaster haemocytes with and without injury. Samples collected 1h post injury.
ERP115941RNA-seq study of sexual reproduction in the diatom Skeletonema marinoi induced by a change in salinity
ERP115944EMG produced TPA metagenomics assembly of the PRJEB25223 data set (Longitudinal_Nasopharyngeal_Microbiome_Dynamics_in_Infants_from_the_Maela_ARI_Birth_Cohort).
ERP115945Discover new allele of HLA B*39 in Taiwan
ERP115946Discover new allele of HLA B*15 in Taiwan
ERP115947Sphaeramia orbicularis (orbiculate cardinalfish)
ERP115948Sphaeramia orbicularis (orbiculate cardinalfish)
ERP115949EMG produced TPA metagenomics assembly of the PRJNA397112 data set (Indian Human Gut Microbiome).
ERP115950EMG produced TPA metagenomics assembly of the PRJEB13832 data set (Local surveillance of infectious diseases and antimicrobial resistance from sewage).
ERP115953Salarias fasciatus (jewelled blenny)
ERP115954Salarias fasciatus (jewelled blenny)
ERP115955The study compares 16S rDNA amplicon and metagenomics sequencing for Pathogen detection in Food safety
ERP115956Myripristis murdjan (pinecone soldierfish)
ERP115957Myripristis murdjan (pinecone soldierfish)
ERP115959Global Phylogeography of the lemon sponge Leucetta chagosensis: from the Indian to the Pacific Oceans
ERP115961Investigating the effects of sequential and simultaneous selection on the evolution of phage resistance
ERP115963Metagenomics analysis of biopsy-derived colonic and terminal ileal mucosa associated microbiota in healthy individuals from a population-based study
ERP115965Genomic Selection for resistance to cattle tick ( Rhipicephalus (Boophilus) microplus) in Hereford and Braford Breeds
ERP115966Hartwig Medical Foundation Benchmark Set
ERP115967Dietary xylo-oligosaccharide supplementation alters gut microbial composition and activity in pigs according to age and dose
ERP115968Discover new allele of HLA A*31 in Taiwan
ERP115969Expression profiles evaluation of biomineralization genes in P.lividus and A. lixula adults collected at volcanic CO2 vents
ERP11597016S rRNA sequences of a new Corynebacterium species
ERP115971Quorum sensing effect on Desulfovibrio vulgaris' ability to form biofilm and to biocorrode in saline conditions
ERP115973Bacterial communities associated to plastic materials retrieved from deep-sea sediments of Peru Basin (Eastern equatorial Pacific Ocean).
ERP115974Maintenance of adaptive dynamics in a bottlenecked population that retained strict outcrossing
ERP115976Genomic data of sea cucumber Stichopus horrens or locally known as gamat emas generated by Illumina Hiseq 2000 sequencing platform.
ERP115977Genomic data of sea cucumber Stichopus horrens or locally known as gamat emas generated by Illumina Hiseq 2000 sequencing platform.
ERP115979EMG produced TPA metagenomics assembly of the PRJNA61259 data set (Oral and Stool Bacterial Sequencing).
ERP115980Metaproteomics reveal that rapid perturbations in organic matter inputs stimulate functional restructuring in Western Arctic Ocean microbiomes
ERP115981TCR-seq analysis of memory phenotype and naive CD4 and CD8 T cells in the steady state
ERP115982metagenomic analysis of panchgavya
ERP115985Earlyvir viromes
ERP115986Methanogenic response to long-term permafrost thaw is determined by the paleoenvironment
ERP115987EDNA Study of the soil fungal populations associated with C. robustum stands on the island of St. Helena
ERP115988Using quantitative mass spectrometry analysis, we identified two histone acetyltransferases, which act specifically at transcription start site histones and are important for correct transcription initiation in Trypanosoma brucei.
ERP115989Single-cell sequencing of RPE-1 cells with Mad2 knockdown
ERP115991Exploring the genetic diversity of Petunia cultivars (P.xhybrida)
ERP115992Microbial changes in early pancreatic cancer progression
ERP115994The basal cm of leaf 4 of GA2OX::PLA1 (193-01) versus wild type in the growth chamber and the field (May-June 2015)
ERP115995The basal cm of leaf 4 of GA2OX::PLA1 (193-01) versus wild type in the growth chamber and the field (May-June 2016)
ERP115996Classic and introgressed selective sweeps shape mimicry loci across a butterfly adaptive radiation
ERP115997Streptococcus mediterraneensis genome
ERP116000Maternal vs artificial rearing shapes the rumen microbiome having minor long-term physiological implications
ERP116001metagenomic study of panchgvya
ERP116002Oral Lactobacillus rhamnosus GR-1 prevents airway function deterioration and promotes gut microbiota resilience in a mouse model of allergic asthma
ERP116003Higher coverage SNP capture data from the Oriente C individual
ERP116004present study aims to evaluate the bacterial community present in the mouth and feces of frog (Melanophryniscus admirabilis) and verify if these microorganisms would have a positive effect on the interaction and adaptation of these frogs in their specific niche
ERP116005Investigating the effects of sequential and simultaneous selection on the evolution of phage resistance
ERP116006Vaginal microbiome composition drives metabolic profiles in healthy pregnancy
ERP116009The BAL microbiota of CF infants (4.5-5.5 years old) from the ACFBAL study
ERP116010Exceptionally large and country-wide outbreak of invasive listeriosis associated with the consumption of black sausage, Germany 2018-2019
ERP116012Fungal Planet Emmonsiellopsis
ERP116013Plant mobile domain proteins MAIN and MAIL1 interact with the phosphatase PP7L to regulate gene expression and silence transposable elements.
ERP116014Exploring the impact of bacterial DNA variation in fish microbiome studies
ERP116015EMG produced TPA metagenomics assembly of the PRJEB9524 data set (Expanded Enteric Virome and Altered Bacterial Microbiome in Acquired Immunodeficiency Syndrome).
ERP116016Methylotrophic fungi in the deep terrestrial groundwater of Outokumpu, Finland
ERP116020Using ribosome profiling to investigate the effect of p53 on translation in cancer cells
ERP116021Brettanomyces bruxellensis UMY321 genome annotation
ERP116025Identifying crossover locations in Arabidopsis thaliana wild type and taf4b Col × Bur F2 populations using genotyping-by-sequencing
ERP116026Angiosperm mitochondrial phylogenomics
ERP116027Prospective Cohort Assessing the Role of the Genotoxin Colibactin From Escherichia Coli B2 in the Genesis of NASH (Coli-NASH)
ERP116029UCD Cleft primary palate 4.9 Mb candidate region targeted sequencing
ERP116030Composition of bacterial and eukaryotic communities in oligotrophic groundwater of the Hainich Critical Zone Exploratory
ERP116031Composition of bacterial and eukaryotic communities in oligotrophic groundwater of the Hainich Critical Zone Exploratory
ERP116032Monitoring fungal communities with the Global Spore Sampling Project
ERP116033Experimental evidence for adaptation to species-specific gut microbiota in house mice
ERP116034Cranial deformation and DNA from 5th century Croatia
ERP116035Cas9-targeted long-read sequencing of cancer biomarkers
ERP116036sunflower study to pathogen
ERP116038Small RNA-Seq of crude and purified extracellular vesicles from venous and arterial human sera
ERP116042Ancient DNA reveals two paternal lineages C2b1a1b1a/F3830 and C2c1b/F845 in the old nomadic people distributed on the Mongolian Plateau
ERP116043Fungal diversity in Boulder Clay glacier (Antarctica)
ERP116045Structured exercise alters the gut microbiota in healthy humans with overweight and obesity – a randomized controlled trial
ERP116046EMG produced TPA metagenomics assembly of the PRJEB27005 data set (Gut metagenomes of rural populations in Cameroon).
ERP116047EMG produced TPA metagenomics assembly of the PRJEB22104 data set (Unusual ecophysiology of Candidate phylum Acetothermia bacteria associated with anaerobic digesters revealed by complete genome sequencing and advanced in situ microscopy).
ERP116050Alternative insights into cinnamoyl esterase activity of Oenococcus oeni
ERP116051Time after time: Temporal variation in the effects of plant species and plant functional groups on soil bacterial and fungal communities
ERP116054Comparison of mid-log transcriptomes of clinical isolates of Mycobacterium tuberculosis
ERP116056Host genetic factors and severity of Andes orthohantavirus infection: a genome wide association study
ERP116057Dts-seq: library preparation for a highly reproducible characterization of the tRNA epitranscriptome by deep sequencing
ERP116058Nanopore metagenomic sequencing of garden soil
ERP116059A deep-sequencing workflow for the fast and efficient generation of high-quality African swine fever virus whole-genome sequences
ERP116061Charting the complexity of the marine microbiome through single cell genomics
ERP116062Radseq of progeny tetrads from strain FY-Tecc-msh2-1, set B
ERP116063Whole genome sequencing of yeast sake strain YO486
ERP116064Whole genome sequencing of yeast sake strain YO1862
ERP116065Whole genome sequencing of yeast white-tecc strain YO502
ERP116066Effect of antibiotic pre-treatment on the engraftment efficiency in mice
ERP116069H3K4me3 ChIPseq in chicken liver
ERP116070MPV17 does not control cancer cell proliferation
ERP116071Analysis of microRNA expression in ADPKD patient derived urinary exosomes by RNAseq
ERP116072Small RNAseq between young and old normal equine chondrocytes
ERP116073RNA-seq of diaphyseal bone from sclerostin-neutralizing antibody treated mice
ERP116074Infiltration of bacteria into intestinal ecosystem by commensal lifestyle conversion
ERP116075DNA Content of Dinoroseobacter shibae Outer Membrane Vesicles
ERP116076Microbial community 16S rRNA from Fram Strait water samples PS85 2014
ERP116077Klebsiella pneumoniae met NDM-1
ERP116078Heavy metal pollution and co-selection for antibiotic resistance through analysis of sediment extracted from the floor of a pond in a heavily industrialised area.
ERP116079Aquila chrysaetos chrysaetos (European golden eagle)
ERP116080PolyA RNA-seq of Paramecium tetraurelia after IFT57 depletion
ERP116081PolyA RNA-seq of Paramecium tetraurelia after MKS2/TMEM216 depletion
ERP116082Mapping of monepantel resistance in Haemonchus contortus
ERP116085Genome-wide discovery and characterization of long non-coding RNAs in African oil palm (Elaeis guineensis Jacq.)
ERP116086EMG produced TPA metagenomics assembly of the PRJDB4437 data set (Osaka Bay Virome).
ERP116087EMG produced TPA metagenomics assembly of the PRJDB4437 data set (Osaka Bay Virome).
ERP116088EMG produced TPA metagenomics assembly of the PRJDB5708 data set (Metagenomic sequences of the Ofunato Bay 2015).
ERP116089Diversity and evolutionary dynamics of carbapenemase-encoding plasmids amongst Klebsiella pneumoniae in Europe
ERP116090EMG produced TPA metagenomics assembly of the PRJEB12379 data set (Metagenome and viral metagenome fraction isolated from Blanes (Mediterranean Sea)).
ERP116091EMG produced TPA metagenomics assembly of the PRJEB12379 data set (Metagenome and viral metagenome fraction isolated from Blanes (Mediterranean Sea)).
ERP116092EMG produced TPA metagenomics assembly of the PRJEB14899 data set (Oil spill dispersant strategies and bioremediation efficientcy).
ERP116093GUELTA: Challenges for assessing vertebrate diversity in turbid Saharan water-bodies using environmental DNA
ERP116094bml SEQ
ERP116096A broad diversity survey of Rhizoctonia-like fungi associated with foliar blights on sympatric poaceae and fabaceae hosts from Brazilian agroecosystems
ERP116098Fecal storage condition induces variations of microbial composition and interpretation of metagenomic analysis
ERP116099Musa acuminata Dwarf Cavendish FUTURE EXOTICS genome sequencing
ERP116102Discover new allele of HLA C*04 in Kuwait
ERP116105EMG produced TPA metagenomics assembly of the PRJEB12379 data set (Metagenome and viral metagenome fraction isolated from Blanes (Mediterranean Sea)).
ERP116106Deconstructing the individual steps of vertebrate translation initiation
ERP116107Single-cell ATAC-seq of bonobo cerebral organoids
ERP116109Effects of HIV infection and opioids on gut microbiota
ERP116111Root and rhizosphere microbial diversity can modulate growth , carbon assimilation and exudation in two genotypes of Brassica napus
ERP116112Associations of the fecal microbial proteome composition and proneness to diet-induced obesity
ERP116113EMG produced TPA metagenomics assembly of the PRJEB9818 data set (The gut DNA viromes of Malawian twins discordant for severe acute undernutrition).
ERP116114Paraburkholderia simonii sp. nov. and P. youngii sp. nov. – Brazilian and Mexican Mimosa-associated rhizobia
ERP116115Geographical location influences the composition of the gut microbiota in wild house mice (Mus musculus domesticus) at a fine spatial scale
ERP116116We studied the interaction between neuroHIV and escalated METH intake on the mPFC in rats.
ERP116117Endosymbionts of Lygaeoidea
ERP116119Ultrastructural, transcriptional and functional differences between human reticulated and non-reticulated platelets
ERP116121Sex-specific programming effects of parental obesity in pre-implantation embryonic development_small RNASeq Data of Sperm
ERP116122Metagenomics of chicken cecal contents from fast and slower growing birds
ERP116123Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
ERP116124Antimicrobial susceptibility pattern of Helicobacter suis isolates from pigs and macaques
ERP116126The Whole-Genome Sequencing and Hybrid Assembly of Mytilus coruscus
ERP116127Pharaoh cuttlefish, Sepia pharaonis, genome reveals more camouflage genes
ERP116128Bacterioplankton communities in the Humboldt upwelling system of Chile
ERP116129In this study, we sequenced the complete genome of 6 hybrid strains from Hanseniaspora genus (H. opuntiae x H. pseudoguilliermondii) found in different environments.
ERP116131Salmonella Typhimurium
ERP116132Transcriptome profiling of total RNA in the COLO 205 cell line with Next-Generation Sequencing (NGS) technologies
ERP116133Analysis of the 3'-end of piRNAs in the COLO 205 cell line through sodium periodate (NaIO4) /ß-Elimination treatment and small RNA-Seq
ERP116134Expression profiles of piRNAs in Colorectal Cancer (CRC) cell lines and Human Testis
ERP116135Characterization of microorganisms and quantification of histamine present in Whitemouth croaker (Micropogonias furnieri) by NGS, qPCR and HPLC-DAD
ERP116136RNA-Immunoprecipitation of PIWIL1/piRNA complexes in COLO 205 cells and deep-sequencing of associated small RNAs with NGS technologies
ERP116137RNA-seq of healthy brain, liver and muscle in 5 mammals
ERP116138Metagenome sequencing of filters from sequential filtering of surface seawater from the North Sea during a spring phytoplankton bloom.
ERP116139Diversity of Genus Rubrivivax
ERP116140Genome-Wide Association Study towards Genomic Predictive Power for High Production and Quality of Milk in American Alpine Goats
ERP116142Discover new allele of HLA A*11 in Taiwan
ERP116144Bartonella saheliensis genome
ERP116146Whole genome sequencing and analysis of Neisseria meningitidis isolates from Malta
ERP116147Multi-centre study to assess the intestinal microbiota of ICU patients upon admission and follow-up of those with a sepsis diagnosis.
ERP116148Albacom - Impact of light and temperature on phytoplankton-bacteria interactions in an algal reactor.
ERP116149Compare projec for Salmonella Typhimurium long term evolution
ERP116150Dental calculus as a tool to study the evolution of the mammalian oral microbiome
ERP116151Feeding exogenous dsRNA interferes with endogenous sRNA accumulation in Paramecium
ERP116153Defra project CR2000F for next generation sequencing of Salmonella isolates
ERP116155The genetic architecture of hybrid fitness under environmental stress
ERP116157Seasonal dynamics of pelagic mycoplanktonic communities: interplay of taxon abundance, specialization grade, and biotic interactions.
ERP116158RNA-seq of four Bacillus subtilis mutants during sporulation
ERP116159Transcriptome from fronds, mature gametophytes and spores of Ceratopteris richardii Hn-n strain.
ERP116160Diversity analysis of genus Rubrivivax
ERP116161Diversity of Rhodobacter
ERP116162Diversity of Rubrivivax benzoatilyticus
ERP116163Diversity of Rubrivivax sp.
ERP116164Diversity of Rhodopseudomonas sp.
ERP116165Diversity of Rubrivivax sp.
ERP116166Diversity of Rhodopseudomonas sp.
ERP116167Diversity of Rhodopseudomonas palustris sp.
ERP116168RNA-seq in 4 tissues of 10 mammals
ERP116169Diversity of Rhodobacter sphaeroides sp.
ERP116170sequence master cell line
ERP116172Gut microbiome in adolescent obesity
ERP116173Effect of Elevated Pressure on Microbial Communities from the Gulf of Mexico
ERP116174Daily consumption of orange juice modulated intestinal microbiota and improved glucose and lipids metabolism in women: a controlled clinical trial
ERP116175Genomic variation among 42 strains of Crithidia bombi and C. expoeki
ERP116176Full 18s sequences from freshwater sponge samples
ERP116177Conjugative transfer of multi-drug resistance genetic elements from environmental water borne bacteria to Escherichia coli
ERP116178In this study we compared various test for identification and characterization of Cronobacter sp.
ERP116179The effect of amplicon length on Taxonomic Analysis of Oxford Nanopore Sequencing
ERP116180Root-associated microbiomes of wheat
ERP116183Changes in the ileal, but not faecal, microbiome in response to increased dietary protein level and enterotoxigenic Escherichia coli exposure in pigs
ERP116184Single-cell ATAC-seq of macaque cerebral organoids
ERP116186Diversity and evolution of New Caledonian endemic Taophila subgenus Lapita Gómez-Zurita et Cardoso (Coleoptera: Chrysomelidae, Eumolpinae)
ERP116188Genome-scale CRISPR-Cas9 knockout screens for enterovirus D68 and rhinovirus C15
ERP116189Short-term temperature shifts impact the metacyclogenesis transcriptional responses in Trypanosoma cruzi.
ERP116192Development of a Novel Gonococcal-Selective LpxC Inhibitor as a Potential Treatment for Gonorrhea.
ERP116194Bacterial biodiversity in the large lakes south of the Alps
ERP116195Molecular basis of resistance to daptomycin in coagulase negative staphylococci.
ERP116196Depth-related variability in viral communities in highly stratified sulphidic mine tailings
ERP116197Effects of microbial disruption on intestinal macrophages.
ERP116199Diet-dependent surplus killing in nematodes
ERP116200Evolutionary relevance of lineages in the European black pine (Pinus nigra) in the transcriptomic era
ERP116201First record of Acanthosiphonia echinata (Rhodomelaceae, Rhodophyta) in the Mediterranean Sea
ERP116202Comparison between eastern and western monarch populations
ERP116203Whole genome sequencing of Yersinia strains
ERP116205Phylogenomics identifies an ancestral burst of gene duplications predating the diversification of aphidomorpha
ERP116206Colonbiome pilot: 9 stools, sequenced by 16S
ERP116207Colonbiome pilot: 9 colon biopsies, sequenced by 16S
ERP116208Genome sequences of novel Streptococcal species
ERP11621018S rRNA amplicon sequencing of eukaryote communities in Lake George, ND, USA
ERP11621118S rRNA amplicon sequencing of eukaryote communities in Lake George, ND, USA
ERP116213The H3K4me3 pattern of mouse renal cortex tissues treated with dexmedetomidine against lipopolysaccharide-induced sepsis
ERP116214Heterogeneous immune and tumor clonal evolution patterns in liver cancer
ERP116215Targeted next-generation sequencing in family with an occurrence of neurodevelopmental disorders and epilepsy
ERP116216In vivo amoxicillin treatment followed by in vitro salmonella challenge
ERP116217Genome sequence of Paraburkholderia sp. strain Msb3
ERP116218Microbial Diversity of Red Sea Urchin Loxechinus albus During Controlled Farming in Puerto Montt, Chile Using 16S rDNA Amplicon Sequencing
ERP116219E.coli co-cultivated with human gut microbiome
ERP116220Repository of Raw Fast5 files generated from multiple MINION runs for 2 black lip abalone samples
ERP116222Differentially expressed genes of Heterobasidion irregulare and H. occedentale during infection Norway spruce.
ERP116223Candidatus phytoplasma mali
ERP116224Mussels larvea 16S
ERP116225Characterizing the Fungal Airway Microbiome in Cystic Fibrosis and Bronchiectasis by Next Generation Sequencing
ERP116226Hypermutated Marek's Disease Virus (MDV, GaHV-2) Genomes Derived from Populations established by Exonuclease Deficient Polymerase Mutants.
ERP116227Global gene expression profiles of 10 gastric cancer (GC) samples and 10 gastric normal adjacent tissue (gNAT) samples
ERP116229ChIP-seq for NF-YA and Pbx4 on whole zebrafish embryos at 3.5hpf
ERP116230Synthetic sequin cDNA spike in controls sequenced on nanopore
ERP116231There are 18 ready-to-eat food samples (8 ready-to-eat meat, 7 ready-to-eat vegetables and 3 ready-to-eat fruit) and 6 human faecal samples. The samples were sequenced on the Illumina, NovaSeq PE150.
ERP116232Fetal osteolineage cell analysis by RNA-Seq
ERP116233Understanding the antifouling mechanisms related to copper oxide and zinc oxide nanoparticles in anaerobic membranes
ERP116234Dairy cows fed on cold-pressed sunflower cake
ERP116235Fetal Osx+ cell analysis by scRNA-Seq
ERP116236In this project we have performed a miRNOme analysis of CF cells from CF patients cultured in air-liquid interface compared to non-CF cells cultured in the same condition.
ERP116237RNAseq study to get insights into opposing susceptibility of the Shiga toxin sensitive ACHN and Stx-refractory Caki-2 cells.
ERP116238Genome sequencing and assembly of Burkholderia cepacia complex isolates belonging to Burkholderia contaminans and Burkholderia lata
ERP116242RNA-seq analysis of ID8 ovarian cancer cells after harvest from malignant ascites
ERP116243RNA-seq analysis of macrophages from normal and tumor-infiltrated omentum
ERP116244Evaluation of a new primer combination to minimize chloroplast plastid contamination in 16S rDNA metabarcoding analyses of alga-associated bacterial communities
ERP116245Gadus morhua (Atlantic cod)
ERP116246Gadus morhua (Atlantic cod)
ERP116248Whole Genome Sequencing of the Common Vole (Microtus arvalis)
ERP116249Whole Genome Sequencing of the Root Vole (Microtus oeconomus)
ERP116250Microbial communities in constituent layers of a geosynthetic clay-liner cover system and underlying tailings at the abandoned Cu/Zn Kam Kotia Mine (ON, Canada)
ERP116251Translational regulation of acetogenesis in Acetobacterium woodii
ERP116253Resist to Organic Load Shocks Enhances the Performance of Autotrophic Biocathode
ERP116254Resist to Organic Load Shocks Enhances the Performance of Autotrophic Biocathode
ERP116255Dramatic alteration of tonsil microbial community composition in RA patients
ERP116263Sorghum EMS mutants exhibit ASV and special starch quality traits
ERP116265Whole genome sequencing of ninespine sticklebacks from Finland and Russia
ERP116266Metatranscriptome of an algal bloom from St Helena Bay on the west coast of South Africa
ERP116267Adult Churra sheep abomasal lymphnode transcriptome
ERP116273The KIR gene transcriptomes of rhesus and cynomolgus macaques
ERP116274Strengths and potential pitfalls of hay-transfer for ecological restoration revealed by RAD-seq analysis in floodplain Arabis species
ERP116275Soil microbiota and nematodes respond differently to application of organic and inorganic fertilizers in grassland columns
ERP116276Transcriptional responses of Leishmania (Leishmania) amazonensis in the presence of Trivalent Sodium Stibogluconate
ERP116277Direct RNA sequencing data for human cell line k562 with ~10% sequins, a spike-in reference standard.
ERP116278Evolutionary differences in the Vegf/Vegfr code reveal organotypic roles for the endothelial cell receptor Kdr in developmental lymphangiogenesis
ERP116281The genome sequence of the red gorgonian (Paramuricea clavata) – a valuable resource to study the impact of climate change in the Mediterranean
ERP116282T cell receptor next-generation sequencing reveals cancer-associated repertoire metrics and reconstitution after chemotherapy in patients with hematological and solid tumors
ERP116284The mitochondrial intergenic regions nad1-cob and cob-rps3 as molecular identification tools for pathogenic members of the genus Cryptococcus
ERP116286Bulk RNA-seq of in vivo mouse T helper cells, comparing RORA KO vs WT, with Nippostrongylus brasiliensis infection
ERP116287Change in soil communities of Jinsha earthen site due to earthen site degradation
ERP116289ESBL-E prevalence and genetic characteristics are described from isolates culture in The Netherlands between 2013 and 2015
ERP116291Effects of the microalgae Chlamydomonas on gastrointestinal health
ERP116293Transcriptomics of a KDELR1-KO cell line reveals defects in ECM formation and modulated cell adhesion properties
ERP116294A comparison of sample processing and bacterial lysis methods for dairy product DNA extraction using automation friendly kits
ERP116295Mediterranean diet intervention in overweight and obese subjects leads to multiple beneficial shifts in gut microbiome and metabolome independently from energy intake
ERP116296Rhizobium sp. UYSO24 was isolated from steams of sugar cane (Saccharum officinarum) grown in Uruguay.
ERP116297In vitro fermentation of gut bacteria with polyphenols adsorbed to apple cell walls.
ERP116298Short term changes in polysaccharide utilisation during a spring phytoplankton bloom on Helgoland
ERP116299production of glutathione s-transferase from Lactobacillus plantarum Ku720558
ERP116300Lysogenic phages from potential pathogenic Vibrio spp. of the North Sea
ERP116301Assessing different components of biodiversity across a river network using eDNA - RUN 2
ERP116302IOUQMER 16S - Incidence of urban patterns on the structure of microbiomes mobilized by runoff waters
ERP116303This is a repository for goat transcriptomes
ERP116306Comparison of tRNA expression between HEK293 and HeLa cells
ERP11630716S rRNA gene meta-barcoding analysis of an urban stormwater infiltration system
ERP116308Structural and dynamic analysis of the BoHV1 transcriptome using long-read cDNA and direct RNA sequencing
ERP116309RNA-seq of intestinal cancer GEMMs
ERP116310EMG produced TPA metagenomics assembly of the PRJNA397990 data set (Georgia Aquarium Sulfur Denitrification Reactor).
ERP116311Nasonia vitripennis Genome Reference Panel 1.0
ERP116312Whole Genome Sequencing of Mycobacterium tilburgii strain MEPHI.
ERP116313Effect of baloxavir on transmission of influenza A viruses in ferrets
ERP116314Whole-exome sequencing of genomic DNA extracted from patient-derived melanoma cell lines resistant to vemurafenib (PLX).
ERP116317Microbial ecology analysis of micro-aerated UASB reactor used to promote the complete removal of the azo dye Direct Black 22
ERP116318Transcriptomics of Trypanosoma cruzi and climate change.
ERP116319Single cell RNA-seq of human breast skin cells
ERP116321Pathogen microflora in sprouts and seeds
ERP116322Tolerance to arsenic in the environmental isolate Terribacillus sp. AE2B 122
ERP116323The transcriptome-wide alternative polyadenylation alteration in herbal formula YYJD-induced activity in A549 lung adenocarcinoma cells
ERP116324Epigenetic control of Lgr5 + intestinal cancer stem cells by the histone methyltransferase Mll1
ERP116325We exome captured and sequenced 397 diverse barley accessions to carry out a genome-wide analysis copy number variants affecting coding sequences. The Roche Nimblegen exome capture array was used to enrich for exon sequences ( The enriched samples were then sequenced using an Illumina HiSeq 2000 sequencer. An average of 2 x 24.6 million paired end Illumina reads per sample were generated, which correspond to approximately 80x coverage of the 61.3 Mbp exome capture space.
ERP116327Soft Sponges with Tricky Tree: On the Phylogeny of Dictyoceratid Sponges
ERP116328Peromyscus Museum Genomics
ERP116329Functional characterisation of monocyte-derived dendritic cells through transcriptomics
ERP116330Transcriptional landscape of Saccharomyces cerevisiae exposed to different concentrations of commercial graphene nanoplatelets
ERP116332The hidden potential of saprotrophic fungi in arable soil: patterns of short-term stimulation by organic amendments
ERP116333Dormancy cycling in buried seeds of Arabidopsis thaliana
ERP116334Bacteriophage, phage-like element and intestinal VLP metagenomics
ERP116339A Transcriptomic Study of Human Corneal Endothelial Cells
ERP116340Genome and transcriptome sequencing of Polarella glacialis CCMP1383 and CCMP2088
ERP116342Characterization of Vaginal Microbiota Profiles in Native Korean Women Related with High Risk Pregnancies
ERP116344Discover new allele of HLA C*16 in Kuwait
ERP116345Duocarmycin mutational signature in HepG2 cells
ERP116346The microbial mat sampled from the surface of wooden cutting board in Hong Kong Wet market
ERP116347Analyses of soil proteolytic (apr encoding) microbes in grassland under ecological intensive and conventional intensive management across Europe
ERP116348The genomes of the livebearing fish species Poeciliopsis retropinna and Poeciliopsis turrubarensis reflect differences in reproductive strategy
ERP116349Benchmarking protocols for the generation of viromes from stream biofilms
ERP116350Functional assessment for clinical use of serum-free adapted NK-92 cells
ERP116351QTL-seq for flowering time variation in Brassica napus
ERP116355Impact of maternal dietary resistant starch and/or a direct high fat diet on a piglet's microbiota
ERP116356Microbiota associated with the skin, gills, and gut of the fish Parachondrostoma toxostoma from five sites in the Durance and Ardeche rivers
ERP116359Escherichia coli phylogenetic B2 subgroups in the infant gut microbiota: predominance of uropathogenic lineages in Swedish infants and enteropathogenic lineages in Pakistani infants
ERP116362TNBC Super-enhancers
ERP116363DNA barcoding confirmation of Andrena samples from Italy
ERP116364Scaphechinus mirabilis ubiquitin
ERP116365Changes in rumen microbial community composition in yak in response to seasonal variations
ERP116368Complete genome sequence of Lake Sinai virus 1 and Lake sinai virus 2 affected honey bees in southern Italy
ERP116369Genomic epidemiology and patterns of antimicrobial resistance of neonatal sepsis in low- and middle-income countries
ERP116370Antiproliferative effect of lactic acid bacteria and bifidobacteria metabolites.
ERP116372The human gut metaproteome is reservoir for millions of potential immunomodulatory peptides.
ERP116373Real-time molecular survey of Mycobacterium tuberculosis isolates from 2008 to 2018 reveals tuberculosis transmission in a tertiary-care university hospital
ERP116374Effect of ethanol dosage and upflow velocity on taxonomic profile and metabolic potential in fluidized bed reactor applied to surfactant removal
ERP116376psychrotrophicum, refers to its ability to grow faster at low temperature conditions
ERP11637716S rRNA of bacterial strains, isolated off White Syndrome diseased Acropora indonesia
ERP116380Moderate phosphorus additions consistently affect community composition of arbuscular mycorrhizal fungi in tropical montane forests in southern Ecuador
ERP116381Single-cell RNA-seq (smartseq2) of mouse T cells during N.Brasiliensis infection, and RORA KO
ERP116382Comparison of extraction methods for recovering ancient microbial DNA from paleofeces
ERP116383Mother-to-infant transmission of the gut virome and bacterial microbiome
ERP116385Discover new allele of HLA DQB1*04 in Kuwait
ERP116386Genome comparison of the five strains of Brettanomyces (Dekkera) NCBI BioProject: PRJNA554210
ERP116387Discover new allele of HLA C*03 in Taiwan
ERP116388Whole genome sequencing study of Acinetobacter isolates from raw meat in Singapore markets
ERP116389Generation of highly diverse peptide library by linear-double-stranded DNA based AND gate genetic circuit in mammalian cells
ERP116390From crops to biogas-anaerobic digestion of mixed silage of cover crops and straw: The influence of manure addition and impact on microbial community structures.
ERP116391Selecting aerotolerance in next generation probiotics: molecular lessons from a Bifidobacterium bifidum strain able to form colonies on the surface of agar plates.
ERP116393Whole genome sequencing of non-typhoidal Salmonellae serovars isolated from humans and poultry in Manipal India
ERP116394New HLA-DRB1*07 allele sequence obtained by Sequence-Based Typing
ERP116395Twenty-Five years of propagation in suspension cell culture results in substantial alterations of the Arabidopsis thaliana genome.
ERP116396DNA-seq or genomic RNA region of HIV-1 reverse transcriptase, protease and integrase gene
ERP116397Outer Ear and Nasopharynx as Sources of the Middle Ear Microbiome during Otitis Media with Effusion
ERP116398The role of DNA repair endonuclease XPF in transcription
ERP116399Peromyscus eremicus genome project
ERP116401RNA-seq of mouse DNA repair endonuclease XPF knock out versus wild type and versus trans retinoic acid (tRA) treated wild type
ERP116402RNA-seq analysis of Col-0 and nrf1-2 mutant under Fe sufficient and Fe deficiency condition
ERP116403Ribo-Seq analysis of Col-0, nrf1-1 and nrf1-2 mutant under Fe sufficient and Fe deficiency condition
ERP116404Mycobacterium bovis description isolates
ERP116405Anthyllis vulneraria and Lotus corniculatus on calamine heaps form nodules with Bradyrhizobium liaoningense-related strains harboring novel in Europe symbiotic nifD haplotypes
ERP116406Temporal succession of early marine biofilms
ERP116407The genome of Colletotrichum noveboracense isolate H1091258, member of the Gloeosporioides clade, was sequenced, assembled and annotated to help study its role in the incidence of Apple Bitter Rot in apple orchards in New York.
ERP116408Next-generation sequencing monitoring of marine biofouling diversity
ERP116409A metagenomic approach to diagnosis, induction and maintenance of deep remission following exclusive enteral nutrition in pediatric Crohn's Disease
ERP116410Gene and genome-centric approaches for evaluate the structural and functional microbial dynamics of an bioreactor applied in laundry wastewater treatment
ERP116411Unexpected variations in posttranscriptional silencing induced by differentially produced dsRNAs
ERP116413Biochar as a carrier for petroleum hydrocarbon-degrading Rhodococcus sp. for bioaugmentation of contaminated soil
ERP116415Discover new allele of HLA C*03 in Taiwan
ERP116416Metapopulation dynamics of nasal carriage Staphylococcus aureus within and among hosts
ERP116417Mini-Metagenomic Sequencing of Groundwater from the Hainich CZE (Germany)
ERP116418SoilForEUROPE-Predicting European forest soil biodiversity and its functioning under ongoing climate change
ERP116419Transcriptional response to NusG depletion in Salmonella
ERP116420Identification by ChIP-Seq of the binding sites of the sigma factor WhiG in the genome of Streptomyces venezuelae
ERP116421Bacillus marasmi genome
ERP116422The duodenal, ileal, jejunal and caecal microbiota in chickens (16s)
ERP116424In vitro assessment of prebiotic properties of xylooligosaccharides produced by Bacillus subtilis 3610 in a single-step process
ERP116425Simultaneous chemical and microbial characterization of atmospheric PM10 and PM2.5 particulate from three land-use types in Rwanda, Central-East Africa
ERP116426Class I Typing
ERP116427eDNA metabarcoding of UK Marinas to detect NIS
ERP116430tpm gene meta-barcoding analysis of an urban stormwater infiltration system
ERP116431Isolation and enrichment of carboxydotrophic bacteria from anaerobic sludge for the production of bio-based chemicals from syngas
ERP116432Spirodela intermedia 7747 WGS PacBio raw reads
ERP116433The effect of milk replacer composition on the intestinal microbiota of pre-ruminant dairy calves
ERP116434Effect of (sub)stoichiometric Fe(III) amounts on LCFA degradation by methanogenic communities
ERP116435Genomics of pigmentation defect in cultivated gilthead seabream (Sparus aurata)
ERP116437Systematics of 'lithistid' tetractinellid demosponges from the Tropical Western Atlantic – implications for phylodiversity and bathymetric distribution
ERP116439Quality assurance for genotyping and resistance testing of Clostridium (Clostridioides) difficile isolates - experiences from the first inter-laboratory ring trial in German speaking countries
ERP116442Whole-genome Sequencing of Salmonella Enteritidis Isolates
ERP116443microbiome analysis for COLONPREDICT cohort
ERP116445Sequencing and Assembly of a typical SB0120 french strain of Mycobacterium tuberculosis variant bovis
ERP116446Analyzing the impact of an in vitro subacute rumen acidosis on the bacterial community and the recovery process applying amplicon Illumina MiSeq and PacBio sequencing
ERP116447Characterization of sixteen Achromobacter xylosoxidans phages from Abidjan, Côte d'Ivoire, isolated on a single clinical strain
ERP116448Genetic, epigenetic and microbiome characterisation of earthworm species and lineages along a radiation exposure gradient at Chernobyl
ERP116450Patient-derived xenografts and matched cell lines identify pharmacogenomic vulnerabilities in colorectal cancer
ERP116451Gut microbiota and bile acid metabolism in infantile cholestasis
ERP116453Molecular characterisation of multi-drug resistant Escherichia coli of bovine origin
ERP116454A study of the metagenome of broiler chickens
ERP116455Patterns and constraints in the evolution of sperm individualization genes in insects, with an emphasis on beetles
ERP116456ChIP-seq of ZMYM2-null and WT human ESCs
ERP116458INGI variation catalogue
ERP116459effects of ZMYM2 KO on gene expression of pluripotent and differentiating ESCs
ERP116460RNAseq transcriptome profiling of Brachypodium distachyon wildtype; GNRF-OE and gnrf mutants; and SWAM4-OE, SWAM4-DR and swam4 mutants.
ERP116461Lymph miRNA in FcgRIIA transgenic mice, in K/BxN rheumatoid arthritis
ERP116462Transcriptional responses to isobutanol in Saccharomyces cerevisiae wild type and gln3 deletion strains
ERP116465Effect of ethanol dosage and upflow velocity on taxonomic profile and metabolic potential in fluidized bed reactor
ERP116467Genomic amplifications associated with insecticide resistance in the dengue vector mosquito Aedes aegypti – from NGS to high-throughput diagnostic assays
ERP116468Impact of fermented goat milk by Lactobacillus casei Lc-1 with passion fruit by-product on the obese microbiota using a dynamic colon model
ERP116470Rapid Diagnosis of Microbial Keratitis using Nanopore Sequencing: a proof-of-concept study
ERP116472Transcriptome profiling of human pre-B ALL cell line 697 upon PBX1 or TCF3 knockdown (RNA-seq)
ERP116473Genome-wide profiling of MED1 and RUNX1 binding in MED1 wild-type and knockout human pre-B ALL cell line 697 (ChIP-seq)
ERP116475RNA-seq of the first-trimester decidua for understanding the maintenance of early gestation as well as pathogenesis in pregnancy-related disorders
ERP116476EMG produced TPA metagenomics assembly of the PRJEB26427 data set (Understanding the microbial basis of body odor in teenagers and kids).
ERP116477Spliceosome iCLIP in multiple cell lines
ERP116478The fungal communities associated with individual bark and ambrosia beetle specimens were characterised using Illumina Miseq pair end sequencing of ITS2 amplicons. Beetle specimens were collected in UK plantation pine forests over summer 2013.
ERP116479RNA-seq of first-trimester chorionic villus for understanding the maintenance of early gestation as well as pathogenesis in pregnancy-related disorders
ERP116480RNA-seq of inflammatory monocytes, patrolling monocytes and neutrophils in wild type and ABIN1[D485N] mice
ERP116483Apple Postharvest Microbiome
ERP116484Transcriptome analysis of Beijerinckiaceae RH AL1 under methanol oxidation conditions
ERP116485Comparative transcriptome analysis provides molecular insights into the interaction of Beet necrotic yellow vein virus and Beet soil-borne mosaic virus with their host sugar beet
ERP116487Transcriptome analysis of Xanthomonas fragariae in strawberry leaves 15 days after inoculation
ERP116488Effect of sIFNAR2 on cellular gene expression.
ERP116489Detection in Malaysia of Rickettsia sp. from Haemaphysalis and Dermacentor ticks
ERP116491Instability of the Pseudoautosomal Boundary in House Mice
ERP116492NOD1 activity attenuates obesity in mice fed a high fat diet
ERP116494Palaquium complete chloroplasts
ERP116495Cancer Gene Panel Sequencing of PDAC and PAC
ERP116496EMG produced TPA metagenomics assembly of the ISS Metagenomes (PRJNA438545) data set.
ERP116497Fungal Planet Pseudosubramaniomyces
ERP116498RNAseq of young adult C. elegans animals fed on three different bacterial diets, E. coli OP50, B. subtilis PXN21 and a mixture of both
ERP116499RNA-seq of Xist deletion mouse models
ERP116501Cell fusing agent virus sequencing from laboratory colonies and wild-caught Aedes aegypti
ERP116504ATAC-seq of mESCs differentiation into neurons
ERP116505Analysis of mucosal and abomasal lymphnode transcriptome for the identification of genes involved in nematode resistance gastrointestinal tract in adult sheep.
ERP116506A novel KPC variant, KPC-41, was identified in a Klebsiella pneumoniae clinical isolate from Switzerland. This ß-lactamase possessed a three amino acid insertion (Pro-Asn-Lys) located between amino acids 269 and 270 compared to the KPC-3 amino acid sequence. Cloning and expression of the blaKPC-41 gene in Escherichia coli, followed by determination of MIC values and kinetic parameters showed that KPC-41 has an increased affinity to ceftazidime and a decreased sensitivity to avibactam, leading to resistance to ceftazidime-avibactam once produced in K. pneumoniae. Furthermore, KPC-41 exhibited a drastic decrease of its carbapenemase activity. This report highlights that a diversity of KPC variants conferring resistance to ceftazidime-avibactam already circulate in Europe.
ERP116507Sox2 ChIP-seq in mESCs and neurons
ERP116508RNA-seq in differentiation of WT129 mESCs to neurons
ERP116509Discover new allele of HLA C*03 in Taiwan
ERP116510Discover new allele of HLA C*03 in Taiwan
ERP116511Discover new allele of HLA C*03 in Taiwan
ERP116513Regulation of Dot-Icm effectors translocation by T4SS GGDEF-EAL proteins in Legionella pneumophila
ERP116514EMG produced TPA metagenomics assembly of the PRJNA46333 data set (Gene-Environment Interactions at the Skin Surface).
ERP116515EMG produced TPA metagenomics assembly of the PRJNA374409 data set (408169 Genome sequencing and assembly).
ERP116516In this study, microRNA profiles were analysed in control-non-senescent (CON) and senescent (SEN) HUVECs and microRNA profiling assessed in their cognate EVs, small (SVs) or large (LVs)
ERP116517Genomic impact of severe population decline in a nomadic songbird
ERP116519Corvus (crows) comparative study, re-sequencing dataset
ERP116520Corvus (crows) comparative study, re-sequencing dataset
ERP116521Salmonella Enteritidis EPIS notification UI-580
ERP116522Identification of lys3 in barley using MutChromSeq
ERP116523RNA-seq of wild-type Salmonella Typhimurium SL1344 in the presence and absence of chlorpromazine or Phe-Arg-Beta-Napthylamide
ERP116524We have performed 16S sequencing experiment on faecal samples obtained from 30 individuals (9 Crohn's disease patients, 11 ulcerative colitis (UC) patients and 10 healthy volunteers). In this study, we examined the imbalance in the gut microbiota in IBD patients compared to healthy volunteers. We find that the gut microbiota of IBD patients is less biodiverse than healthy individuals. Also, the changes are mainly in 4 most abundant phyla including Firmicutes, Bacteroidetes, Actinobacteria and Proteobacteria.
ERP116525IL6 receptor deficiency
ERP116527First report of pittosporum cryptic virus-1 in Lebanon
ERP116529The microbiome of four soil samples from arid and semi-arid region of Saudi Arabia.
ERP116530Fungal Planet description sheets: 1042–1111
ERP116531Europe's Lost Frontiers
ERP116532EMG produced TPA metagenomics assembly of the PRJNA266117 data set (Human skin bacterial metagenome and Virome Metagenome).
ERP116533EMG produced TPA metagenomics assembly of the PRJNA300541 data set (Antibiotic resistance exchange between microbiota in resource-poor settings in Latin America).
ERP116536Soil 16S and ITS2 sequences from the Clocaenog climate change experiment
ERP116538Forest soil microbial communities across eastern China
ERP116540Thermal and alkaline/acid sludge pre-treatment on digestion sludge microbiome
ERP116541Evolution of transposable element copy number control in yeast
ERP116542We explored whether N. defodiens transfer enteric bacteria to their anal secretions and ultimately to a carcass.
ERP116544EMG produced TPA metagenomics assembly of the PRJNA275349 data set (Human Microbiome Environment Metagenome).
ERP116545EMG produced TPA metagenomics assembly of the PRJNA336640 data set (Marine sediment microbial community from La Parguera, Puerto Rico - PR Tt Sediment 2 metagenome).
ERP116546Transcriptome analysis of the venomous glands of the wandering spider Phoneutria boliviensis
ERP116548Detection of structural variation in RPE-1 cell line
ERP116550microbe community in soil
ERP116551A haplotype map of foxtail millet genome
ERP116552Changes in the Gut Microbiota of Mice Orally Exposed to Methylimidazolium Ionic Liquids: an Observational Study
ERP116553EMG produced TPA metagenomics assembly of the PRJEB19522 data set (Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N 2 but may denitrify.).